Motif IL_58760.1 Version IL_58760.1 of this group appears in releases 3.12 to 3.16
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 10 | 11 | 1-11 | 2-10 | 3-8 | 4-7 | 5-6 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4LFB_026 | 4LFB | 0.0000 | 3 | A | SSU rRNA | U | 605 | G | 606 | G | 610 | A | 611 | C | 612 | * | G | 628 | G | 629 | G | 630 | G | 631 | A | 632 | G | 633 | cWW | tSH | cWW | ||
| 2 | IL_4Y4O_239 | 4Y4O | 0.7956 | 1 | 2A | LSU rRNA | G | 1526 | G | 1527 | A | 1528 | A | 1528|||A | G | 1529 | * | U | 1540 | G | 1541 | A | 1542 | A | 1544 | A | 1545 | C | 1546 | cWW | tSH | tHH | tHS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UGAAAGAC*GGGGAG | 1 |
| GGAAG*UGACAAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAAAGA*GGGA | 1 |
| GAA*GACAA | 1 |
- Annotations
-
- (2)
- Basepair signature
- cWW-tSH-R-tHH-tHS-cWW
- Heat map statistics
- Min 0.80 | Avg 0.40 | Max 0.80
Coloring options: