#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3break 4 5 6 7 81-82-53-46-7
1 IL_2QBG_0152QBG0.00000B23S rRNAU293A294G295*C343A344A345A346A347cWWntHScWW
2 IL_4NVV_0134NVV0.42140A23S Ribosomal RNAU317A318G319*C367G368A369A370A371cWWcWWcSH

3D structures

Complete motif including flanking bases
SequenceCounts
UAG*CAAAA1
UAG*CGAAA1
Non-Watson-Crick part of the motif
SequenceCounts
A*AAA1
A*GAA1

Release history

Release1.141.15
Date2014-04-272014-06-20
StatusNew id, 1 parentExact match

Parent motifs

Parent motifCommon motif instancesOnly in IL_60613.1Only in the parent motif
IL_00998.1
Compare
IL_2QBG_015IL_4NVV_013IL_3V2F_013

Children motifs

Child motifCommon motif instancesOnly in IL_60613.1Only in the child motif
IL_63917.1
Compare
IL_2QBG_015IL_4NVV_013IL_1VWW_041, IL_4QCN_012
Annotations
  • (2)
  • Basepair signature
    cWW-L-R-R-R-cWW
    Heat map statistics
    Min 0.42 | Avg 0.21 | Max 0.42
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