Motif IL_62067.1 Version IL_62067.1 of this group appears in releases 3.88 to 3.88
#S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 11 | 1-11 | 2-10 | 4-8 | 5-8 | 6-7 | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_5XTM_002 | 5XTM | 0.0000 | 1 | Other IL | B | RNA (47-MER) | G | 8 | A | 9 | U | 10 | G | 11 | A | 12 | A | 14 | * | U | 35 | A | 36 | A | 37 | C | 38 | C | 39 | cWW | ncWWa | tSH | cBW | cWW |
2 | IL_1D4R_002 | 1D4R | 0.7333 | 1 | Other IL | A+B | 29-MER OF MODIFIED SRP RNA HELIX 6 | G | 12 | G | 13 | G | 14 | A | 15 | G | 16 | C | 17 | * | G | 12 | G | 14 | A | 15 | G | 16 | C | 17 | cWW | cBW | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
GAUGAAA*UAACC | 1 |
GGGAGC*GGGAGC | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
AUGAA*AAC | 1 |
GGAG*GGAG | 1 |
Release history
Release | 3.88 |
---|---|
Date | 2024-09-11 |
Status | New id, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Other IL (2)
- Basepair signature
- cWW-L-R-L-R-L-R-L-cWW
- Heat map statistics
- Min 0.73 | Avg 0.37 | Max 0.73
Coloring options: