Motif IL_64181.2 Version IL_64181.2 of this group appears in releases 3.80 to 3.87
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 11 | 1-11 | 2-10 | 3-10 | 4-9 | 5-8 | 6-7 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4V88_393 | 4V88 | 0.0000 | 0 | A6 | SSU rRNA | U | 117 | U | 118 | A | 119 | U | 120 | U | 121 | U | 122 | * | A | 295 | U | 296 | U | 297 | C | 298 | A | 299 | cWW | ntHS | cWw | cWw | cWW | |
| 2 | IL_8C3A_401 | 8C3A | 0.0849 | 0 | CM | SSU rRNA | U | 117 | U | 118 | A | 119 | U | 120 | U | 121 | U | 122 | * | A | 293 | U | 294 | U | 295 | C | 296 | A | 297 | cWW | ntHS | cWw | cWw | cWW | |
| 3 | IL_1L9A_006 | 1L9A | 0.6570 | 1 | B | signal recognition particle RNA S domain | U | 181 | G | 182 | A | 184 | C | 185 | C | 186 | G | 187 | * | C | 212 | A | 213 | A | 214 | A | 215 | A | 216 | cWW | ntHH | ncWWa | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UUAUUU*AUUCA | 2 |
| UGAACCG*CAAAA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAUU*UUC | 2 |
| GAACC*AAA | 1 |
Release history
| Release | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 |
|---|---|---|---|---|---|---|---|---|
| Date | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 |
| Status | Updated, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-L-tHS-cWW-cWW-cWW
- Heat map statistics
- Min 0.08 | Avg 0.31 | Max 0.66
Coloring options: