Motif IL_65263.1 Version IL_65263.1 of this group appears in releases 3.77 to 3.79
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 1-7 | 2-6 | 4-5 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4KQY_005 | 4KQY | 0.9337 | 1 | A | SAM-I riboswitch | U | 52 | G | 53 | A | 55 | A | 56 | * | U | 69 | G | 70 | A | 71 | cWW | ncWB | cWW |
| 2 | IL_4WSM_372 | 4WSM | 0.0000 | 0 | 1K | tRNA | G | 46 | C | 47 | C | 48 | C | 49 | * | G | 55 | G | 56 | C | 57 | cWW | ncWW | ncWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UGUAA*UGA | 1 |
| GCCC*GGC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GUA*G | 1 |
| CC*G | 1 |
- Annotations
-
- (2)
- Basepair signature
- cWW-L-R-L-cWW
- Heat map statistics
- Min 0.93 | Avg 0.47 | Max 0.93
Coloring options: