#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5 6break 7 8 9 10 11 121-122-114-95-86-7
1 IL_4WF9_0664WF90.16071tSH-tSH-tHH-tHSX LSU rRNAC1730G1731U1732A1733A1734C1735*G1740G1741A1742A1744A1745G1746cWWntSHtHHtHScWW
2 IL_7A0S_0637A0S0.12681tSH-tSH-tHH-tHSX LSU rRNAC1703G1704U1705A1706A1707C1708*G1713A1714A1715A1717A1718G1719cWWtSHtHHtHScWW
3 IL_5J7L_3085J7L0.11071tSH-tSH-tHH-tHSDA LSU rRNAC1686G1687U1688A1689A1690C1691*G1696G1697A1698A1700A1701G1702cWWtSHtHHtHScWW
4 IL_7RQB_0687RQB0.10591tSH-tSH-tHH-tHS1A LSU rRNAC1686G1687U1688A1689A1690C1691*G1696G1697A1698A1700A1701G1702cWWtSHtHHtHScWW
5 IL_5TBW_0785TBW0.08151tSH-tSH-tHH-tHS1 LSU rRNAC1918G1919U1920A1921A1922C1923*G1928G1929A1930A1932A1933G1934cWWtSHtHHtHScWW
6 IL_4V9F_0634V9F0.00001tSH-tSH-tHH-tHS0 LSU rRNAC1764G1765U1766A1767C1768C1769*G1774A1775A1776A1778A1779G1780cWWtSHtHHtHScWW
7 IL_4WF9_0674WF90.79930X LSU rRNAU1756U1757A1758G1759G1760G1761*C1768C1769C1770A1771G1772A1773ncWWncWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
CGUAAC*GGAGAAG3
CGUAAC*GAAGAAG1
CGUAAC*GGAUAAG1
CGUACC*GAAGAAG1
UUAGGG*CCCAGA1
Non-Watson-Crick part of the motif
SequenceCounts
GUAA*GAGAA3
GUAA*AAGAA1
GUAA*GAUAA1
GUAC*AAGAA1
UAGG*CCAG1

Release history

Release3.773.783.79
Date2023-12-062024-01-032024-01-03
StatusNew id, > 2 parentsExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • tSH-tSH-tHH-tHS (6)
  • (1)
  • Basepair signature
    cWW-tSH-tSH-tHH-tHS-cWW
    Heat map statistics
    Min 0.06 | Avg 0.28 | Max 0.88
    Help

    Coloring options:

    IL_4WF9_066:IL_4WF9_066 = 0IL_4WF9_066:IL_7A0S_063 = 0.1338IL_4WF9_066:IL_5J7L_308 = 0.1421IL_4WF9_066:IL_7RQB_068 = 0.1336IL_4WF9_066:IL_5TBW_078 = 0.1369IL_4WF9_066:IL_4V9F_063 = 0.1607IL_4WF9_066:IL_4WF9_067 = 0.8844IL_7A0S_063:IL_4WF9_066 = 0.1338IL_7A0S_063:IL_7A0S_063 = 0IL_7A0S_063:IL_5J7L_308 = 0.1021IL_7A0S_063:IL_7RQB_068 = 0.1001IL_7A0S_063:IL_5TBW_078 = 0.093IL_7A0S_063:IL_4V9F_063 = 0.1268IL_7A0S_063:IL_4WF9_067 = 0.8782IL_5J7L_308:IL_4WF9_066 = 0.1421IL_5J7L_308:IL_7A0S_063 = 0.1021IL_5J7L_308:IL_5J7L_308 = 0IL_5J7L_308:IL_7RQB_068 = 0.0649IL_5J7L_308:IL_5TBW_078 = 0.0986IL_5J7L_308:IL_4V9F_063 = 0.1107IL_5J7L_308:IL_4WF9_067 = 0.8719IL_7RQB_068:IL_4WF9_066 = 0.1336IL_7RQB_068:IL_7A0S_063 = 0.1001IL_7RQB_068:IL_5J7L_308 = 0.0649IL_7RQB_068:IL_7RQB_068 = 0IL_7RQB_068:IL_5TBW_078 = 0.0881IL_7RQB_068:IL_4V9F_063 = 0.1059IL_7RQB_068:IL_4WF9_067 = 0.8803IL_5TBW_078:IL_4WF9_066 = 0.1369IL_5TBW_078:IL_7A0S_063 = 0.093IL_5TBW_078:IL_5J7L_308 = 0.0986IL_5TBW_078:IL_7RQB_068 = 0.0881IL_5TBW_078:IL_5TBW_078 = 0IL_5TBW_078:IL_4V9F_063 = 0.0815IL_5TBW_078:IL_4WF9_067 = 0.8683IL_4V9F_063:IL_4WF9_066 = 0.1607IL_4V9F_063:IL_7A0S_063 = 0.1268IL_4V9F_063:IL_5J7L_308 = 0.1107IL_4V9F_063:IL_7RQB_068 = 0.1059IL_4V9F_063:IL_5TBW_078 = 0.0815IL_4V9F_063:IL_4V9F_063 = 0IL_4V9F_063:IL_4WF9_067 = 0.7993IL_4WF9_067:IL_4WF9_066 = 0.8844IL_4WF9_067:IL_7A0S_063 = 0.8782IL_4WF9_067:IL_5J7L_308 = 0.8719IL_4WF9_067:IL_7RQB_068 = 0.8803IL_4WF9_067:IL_5TBW_078 = 0.8683IL_4WF9_067:IL_4V9F_063 = 0.7993IL_4WF9_067:IL_4WF9_067 = 0IL_4WF9_066IL_7A0S_063IL_5J7L_308IL_7RQB_068IL_5TBW_078IL_4V9F_063IL_4WF9_067Discrepancy0.000.200.400.600.80
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