Motif IL_67767.4 Version IL_67767.4 of this group appears in releases 3.96 to 3.96
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 1-9 | 2-7 | 3-4 | 3-8 | 4-8 | 5-6 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1U6B_003 | 1U6B | 0.1995 | 0 | Receptor of 11-nt loop-receptor motif | B | 197-MER | C | 61 | U | 62 | A | 63 | A | 64 | G | 65 | * | U | 80 | A | 81 | U | 82 | G | 83 | cWW | tWH | cSH | ncWW | cWW | |
| 2 | IL_4PCJ_005 | 4PCJ | 0.0671 | 0 | A | trCUG-3('5) | C | 8 | U | 9 | A | 10 | A | 11 | G | 12 | * | U | 25 | A | 26 | U | 27 | G | 28 | cWW | tWH | cSH | cWW | cWW | ||
| 3 | IL_5VCI_006 | 5VCI | 0.0000 | 0 | A+B | RNA (22-mer) + RNA (12-mer) | C | 8 | U | 9 | A | 10 | A | 11 | G | 12 | * | U | 2 | A | 3 | U | 4 | G | 5 | cWW | tWH | cSH | cWW | cWW | ||
| 4 | IL_1U6B_013 | 1U6B | 0.1161 | 0 | B | 197-MER | C | 147 | U | 148 | A | 149 | A | 150 | G | 151 | * | U | 160 | A | 161 | U | 162 | G | 163 | cWW | tWH | cSH | cWW | cWW | ||
| 5 | IL_3IGI_012 | 3IGI | 0.1335 | 0 | Receptor of 11-nt loop-receptor motif | A | Group IIC intron | C | 346 | U | 347 | A | 348 | A | 349 | G | 350 | * | U | 332 | A | 333 | U | 334 | G | 335 | cWW | tWH | cSH | ncWW | cWW | |
| 6 | IL_5DCV_010 | 5DCV | 0.1323 | 0 | D | RNA (47-MER) | C | 45 | U | 46 | A | 47 | A | 48 | G | 49 | * | U | 3 | A | 4 | U | 5 | G | 6 | cWW | tWH | cSH | ntSH | cWW | cWW | |
| 7 | IL_5XTM_008 | 5XTM | 0.1723 | 0 | D | RNA (47-MER) | C | 41 | U | 42 | A | 43 | A | 44 | G | 45 | * | U | 3 | A | 4 | U | 5 | G | 6 | cWW | tWH | cSH | ntSH | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUAAG*UAUG | 7 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAA*AU | 7 |
Release history
| Release | 3.96 |
|---|---|
| Date | 2025-04-23 |
| Status | Updated, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (5)
- Receptor of 11-nt loop-receptor motif (2)
- Basepair signature
- cWW-tWH-cWW-cSH-cWW
- Heat map statistics
- Min 0.07 | Avg 0.14 | Max 0.23
Coloring options: