Motif IL_70280.1 Version IL_70280.1 of this group appears in releases 0.6 to 1.4

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Chain(s)	Standardized name		1		2		3		4		5	break		6		7		8		9		10	1-10	2-9	3-8	4-7	5-6
1	IL_2XZM_046	2XZM	0.0000	0	A	18S RRNA	G	863	U	864	A	865	U	866	U	867	*	A	901	G	902	G	903	A	904	C	905	cWW		cWW	ncWW	cWW
2	IL_3U5F_003	3U5F	0.8395	1	6	18S rRNA	U	37	C	38	A	39	A	40	A	41	*	U	466	G	467	C	469	A	470	A	471	cWW	cWW		tHS	cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
GUAUU*AGGAC	1
UCAAA*UGACAA	1

Non-Watson-Crick part of the motif

Sequence	Counts
UAU*GGA	1
CAA*GACA	1

Release history

Release	0.6	0.7	0.8	0.9	0.10	0.11	0.12	1.0	1.1	1.2	1.3	1.4
Date	2012-04-02	2013-02-17	2013-02-17	2013-02-17	2013-02-17	2013-02-17	2013-02-17	2013-03-04	2013-04-08	2013-05-04	2013-06-01	2013-07-01
Status	New id, 1 parent	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match

Parent motifs

Parent motif	Common motif instances	Only in IL_70280.1	Only in the parent motif
IL_74594.1 Compare	IL_2XZM_046	IL_3U5F_003

Children motifs

Child motif	Common motif instances	Only in IL_70280.1	Only in the child motif
IL_97509.1 Compare	IL_3U5F_003	IL_2XZM_046	IL_4BPP_046

Annotations: (2)
Basepair signature: cWW-cWW-L-R-R-L-cWW
Heat map statistics: Min 0.84 | Avg 0.42 | Max 0.84

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Coloring options: Nucleotide numbers

Motif IL_70280.1 Version IL_70280.1 of this group appears in releases 0.6 to 1.4 Download Csv Json

3D structures

Complete motif including flanking bases

Non-Watson-Crick part of the motif

Release history

Parent motifs

Children motifs

Motif IL_70280.1 Version IL_70280.1 of this group appears in releases 0.6 to 1.4

Download

Csv

Json