#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5break 6 7 8 9 101-102-93-84-75-6
1 IL_4BPP_0464BPP0.00000A18S RRNAG863U864A865U866U867*A901G902G903A904C905cWWcWWcWWacWW
2 IL_3U5F_0033U5F0.82161618S rRNAU37C38A39A40A41*U466G467C469A470A471cWWcWWtHScWW

3D structures

Complete motif including flanking bases
SequenceCounts
GUAUU*AGGAC1
UCAAA*UGACAA1
Non-Watson-Crick part of the motif
SequenceCounts
UAU*GGA1
CAA*GACA1

Release history

Release1.51.61.71.81.91.101.111.121.13
Date2013-08-032013-08-312013-09-282013-11-052013-12-072014-01-042014-02-012014-03-012014-03-29
StatusNew id, 1 parentExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

Parent motifCommon motif instancesOnly in IL_97509.1Only in the parent motif
IL_70280.1
Compare
IL_3U5F_003IL_4BPP_046IL_2XZM_046

Children motifs

Child motifCommon motif instancesOnly in IL_97509.1Only in the child motif
IL_97509.2
Compare
IL_4BPP_046, IL_3U5F_003IL_1VW3_089
Annotations
  • (2)
  • Basepair signature
    cWW-cWW-L-R-R-L-cWW
    Heat map statistics
    Min 0.82 | Avg 0.41 | Max 0.82
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