Motif IL_74697.1 Version IL_74697.1 of this group appears in releases 3.77 to 3.83
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | 7 | 1-7 | 3-6 | 4-5 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4QIK_001 | 4QIK | 0.8031 | 0 | D+C | RNA (23-mer) | U | 11 | G | 12 | U | 13 | G | 14 | * | C | 10 | U | 11 | G | 12 | cWW | cWw | cWW | |
| 2 | IL_2O3Y_002 | 2O3Y | 0.7594 | 2 | Decoding loop related | A+B | RNA (23-mer) | C | 7 | G | 8 | C | 9 | U | 10 | * | A | 38 | A | 39 | G | 42 | cWW | cWWa | cWW |
| 3 | IL_4ZNP_003 | 4ZNP | 0.1200 | 9 | A | pfI Riboswitch | C | 34 | G | 35 | U | 36 | G | 37 | * | C | 12 | U | 13 | G | 23 | cWW | cWw | cWW | |
| 4 | IL_5BTP_005 | 5BTP | 0.0000 | 8 | B | RNA (62-MER) | C | 38 | A | 39 | U | 40 | G | 41 | * | C | 15 | U | 16 | G | 25 | cWW | cWw | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UGUG*CUG | 1 |
| CGCU*AAAAG | 1 |
| CGUG*CUGGCGGAUUAG | 1 |
| CAUG*CUGACGGAACG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GU*U | 1 |
| GC*AAA | 1 |
| GU*UGGCGGAUUA | 1 |
| AU*UGACGGAAC | 1 |
Release history
| Release | 3.77 | 3.78 | 3.79 | 3.80 | 3.81 | 3.82 | 3.83 |
|---|---|---|---|---|---|---|---|
| Date | 2023-12-06 | 2024-01-03 | 2024-01-03 | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Decoding loop related (1)
- Basepair signature
- cWW-L-cWW-cWW
- Heat map statistics
- Min 0.12 | Avg 0.47 | Max 0.80
Coloring options: