Motif IL_74876.1 Version IL_74876.1 of this group appears in releases 0.1 to 0.12
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 10 | 1-10 | 2-9 | 4-7 | 5-6 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3OWZ_004 | 3OWZ | 0.0000 | 1 | A | Domain II of glycine riboswitch | G | 38 | C | 39 | A | 40 | A | 41 | G | 42 | * | U | 61 | G | 62 | A | 63 | A | 64 | C | 66 | cWW | tWH | tHS | cWW | |
| 2 | IL_3OWZ_008 | 3OWZ | 0.0751 | 1 | B | Domain II of glycine riboswitch | G | 38 | C | 39 | A | 40 | A | 41 | G | 42 | * | U | 61 | G | 62 | A | 63 | A | 64 | C | 66 | cWW | tWH | tHS | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GCAAG*UGAAAC | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| CAA*GAAA | 2 |
Release history
| Release | 0.1 | 0.2 | 0.3 | 0.4 | 0.5 | 0.6 | 0.7 | 0.8 | 0.9 | 0.10 | 0.11 | 0.12 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2011-12-08 | 2011-12-08 | 2011-12-08 | 2011-12-08 | 2011-12-08 | 2012-04-02 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 |
| Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
| Child motif | Common motif instances | Only in IL_74876.1 | Only in the child motif |
|---|---|---|---|
| IL_74876.2 Compare | IL_3OWZ_004, IL_3OWZ_008 | IL_4A1B_008 |
- Annotations
- Basepair signature
- cWW-tWH-L-R-tHS-cWW
- Heat map statistics
- Min 0.08 | Avg 0.04 | Max 0.08
Coloring options: