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Motif IL_75255.1 Version IL_75255.1 of this group appears in releases 3.80 to 3.88

#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5break 6 71-31-72-42-63-74-75-6
1 IL_8C3A_4498C3A0.39832C-loopCM SSU rRNAU1604C1605C1606C1607U1608*A1142A1145cSHcWWncSHtWHcWScWW
2 IL_1KOG_0071KOG0.35511C-loopOThreonyl-tRNA synthetase mRNAC96C97A98C99U100*A74G76ncSHcWWcSHtWHcWScWW
3 IL_6XJQ_0016XJQ0.36171C-loopASelf-alkylating ribozyme (58-MER)G5C6U7C8C9*G52C54ncSHcWWcSHtWHncWScWW
4 IL_4MGN_0014MGN0.29511C-loopAglyQS T box riboswitchC29C30U31C32U33*A73G75cWWncSHntWHntHScWScWW
5 IL_6CZR_1276CZR0.00000C-loop1a SSU rRNAG367C368A369A370U371*A385C386cWWtWHcWScWW
6 IL_8C3A_4168C3A0.17900C-loopCM SSU rRNAC441C442A443A444U445*A458G459cSHcWWtWHcWScWW
7 IL_5J7L_0185J7L0.18120C-loopAA SSU rRNAA371C372A373A374U375*A389U390cSHcWWtWHcWScWW
8 IL_4LFB_0154LFB0.18580C-loopA SSU rRNAG371C372A373A374U375*A389C390cWWntWHcWScWW

3D structures

Complete motif including flanking bases
SequenceCounts
GCAAU*AC2
UCCCU*ACCA1
CCACU*AUG1
GCUCC*GUC1
CCUCU*ACG1
CCAAU*AG1
ACAAU*AU1
Non-Watson-Crick part of the motif
SequenceCounts
CAA*4
CCC*CC1
CAC*U1
CUC*U1
CUC*C1

Release history

Release3.803.813.823.833.843.853.863.873.88
Date2024-01-312024-02-282024-03-272024-04-242024-05-222024-06-192024-07-172024-08-142024-09-11
StatusNew id, 2 parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • C-loop (8)
    • Basepair signature
    cWW-cSH-cWS-cSH-tWH-cWW
    Heat map statistics
    Min 0.13 | Avg 0.27 | Max 0.47
    Help

    Coloring options:

    IL_8C3A_449:IL_8C3A_449 = 0IL_8C3A_449:IL_1KOG_007 = 0.1344IL_8C3A_449:IL_6XJQ_001 = 0.23IL_8C3A_449:IL_4MGN_001 = 0.2528IL_8C3A_449:IL_6CZR_127 = 0.3983IL_8C3A_449:IL_8C3A_416 = 0.4165IL_8C3A_449:IL_5J7L_018 = 0.4261IL_8C3A_449:IL_4LFB_015 = 0.468IL_1KOG_007:IL_8C3A_449 = 0.1344IL_1KOG_007:IL_1KOG_007 = 0IL_1KOG_007:IL_6XJQ_001 = 0.2049IL_1KOG_007:IL_4MGN_001 = 0.2367IL_1KOG_007:IL_6CZR_127 = 0.3551IL_1KOG_007:IL_8C3A_416 = 0.3833IL_1KOG_007:IL_5J7L_018 = 0.4023IL_1KOG_007:IL_4LFB_015 = 0.4455IL_6XJQ_001:IL_8C3A_449 = 0.23IL_6XJQ_001:IL_1KOG_007 = 0.2049IL_6XJQ_001:IL_6XJQ_001 = 0IL_6XJQ_001:IL_4MGN_001 = 0.1901IL_6XJQ_001:IL_6CZR_127 = 0.3617IL_6XJQ_001:IL_8C3A_416 = 0.3752IL_6XJQ_001:IL_5J7L_018 = 0.3957IL_6XJQ_001:IL_4LFB_015 = 0.4353IL_4MGN_001:IL_8C3A_449 = 0.2528IL_4MGN_001:IL_1KOG_007 = 0.2367IL_4MGN_001:IL_6XJQ_001 = 0.1901IL_4MGN_001:IL_4MGN_001 = 0IL_4MGN_001:IL_6CZR_127 = 0.2951IL_4MGN_001:IL_8C3A_416 = 0.3313IL_4MGN_001:IL_5J7L_018 = 0.3347IL_4MGN_001:IL_4LFB_015 = 0.3736IL_6CZR_127:IL_8C3A_449 = 0.3983IL_6CZR_127:IL_1KOG_007 = 0.3551IL_6CZR_127:IL_6XJQ_001 = 0.3617IL_6CZR_127:IL_4MGN_001 = 0.2951IL_6CZR_127:IL_6CZR_127 = 0IL_6CZR_127:IL_8C3A_416 = 0.179IL_6CZR_127:IL_5J7L_018 = 0.1812IL_6CZR_127:IL_4LFB_015 = 0.1858IL_8C3A_416:IL_8C3A_449 = 0.4165IL_8C3A_416:IL_1KOG_007 = 0.3833IL_8C3A_416:IL_6XJQ_001 = 0.3752IL_8C3A_416:IL_4MGN_001 = 0.3313IL_8C3A_416:IL_6CZR_127 = 0.179IL_8C3A_416:IL_8C3A_416 = 0IL_8C3A_416:IL_5J7L_018 = 0.1324IL_8C3A_416:IL_4LFB_015 = 0.1817IL_5J7L_018:IL_8C3A_449 = 0.4261IL_5J7L_018:IL_1KOG_007 = 0.4023IL_5J7L_018:IL_6XJQ_001 = 0.3957IL_5J7L_018:IL_4MGN_001 = 0.3347IL_5J7L_018:IL_6CZR_127 = 0.1812IL_5J7L_018:IL_8C3A_416 = 0.1324IL_5J7L_018:IL_5J7L_018 = 0IL_5J7L_018:IL_4LFB_015 = 0.1767IL_4LFB_015:IL_8C3A_449 = 0.468IL_4LFB_015:IL_1KOG_007 = 0.4455IL_4LFB_015:IL_6XJQ_001 = 0.4353IL_4LFB_015:IL_4MGN_001 = 0.3736IL_4LFB_015:IL_6CZR_127 = 0.1858IL_4LFB_015:IL_8C3A_416 = 0.1817IL_4LFB_015:IL_5J7L_018 = 0.1767IL_4LFB_015:IL_4LFB_015 = 0IL_8C3A_449IL_1KOG_007IL_6XJQ_001IL_4MGN_001IL_6CZR_127IL_8C3A_416IL_5J7L_018IL_4LFB_015Discrepancy0.000.100.200.300.40
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