#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4break 5 6 7 8 9 10 11 12 13 14 15 16 17 181-182-173-64-54-175-1710-1611-15
1 IL_5J7L_3295J7L0.69942Kink-turn relatedDA LSU rRNAG2124G2125A2126G2128*C2160C2161G2162A2163C2164C2165U2166U2167G2168A2169A2170A2171A2173C2174cWW
2 IL_3U4M_0033U4M0.00000B LSU rRNAG2124G2125A2126G2127*C2161G2162C2163C2164G2165G2166U2167G2168A2169A2170A2171U2172A2173C2174cWWtSHntSscWWtsSncsStWHtWH
3 IL_1MZP_0031MZP0.17710Bfragment of 23S rRNAG20G21A22G23*C32G33C34C35G36G37U38G39A40A41A42U43A44C45cWWtSHntSscWWntsSntWHtWH

3D structures

Complete motif including flanking bases
SequenceCounts
GGAG*CGCCGGUGAAAUAC2
GGAGG*CCGACCUUGAAAUAC1
Non-Watson-Crick part of the motif
SequenceCounts
GA*GCCGGUGAAAUA2
GAG*CGACCUUGAAAUA1

Release history

Release3.33.43.53.63.73.83.93.103.23.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.76
Date2018-03-082018-04-062018-05-042018-06-012018-06-292018-07-272018-08-242018-09-212018-09-262018-10-192018-11-162018-12-142019-01-112019-02-082019-03-082019-04-052019-05-032019-05-312019-06-282019-07-262019-08-232019-09-192019-10-162019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-172022-10-122022-11-092022-12-072023-01-042023-02-012023-03-012023-03-292023-04-262023-05-242023-06-212023-07-192023-08-162023-09-132023-10-112023-11-08
StatusExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchNew id, no parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (2)
  • Kink-turn related (1)
  • Basepair signature
    cWW-tSH-tSS-tSS-tWH-tWH-R-R-R-R-R-R-cWW
    Heat map statistics
    Min 0.18 | Avg 0.36 | Max 0.73
    Help

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