Motif IL_75449.1 Version IL_75449.1 of this group appears in releases 0.6 to 0.6
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | break | 3 | 4 | 5 | 6 | 1-6 | 2-3 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1S72_017 | 1S72 | 0.0000 | 0 | 0 | LSU rRNA | G | 554 | U | 555 | * | A | 602 | A | 603 | G | 604 | C | 605 | cWW | cWW |
| 2 | IL_3U5F_020 | 3U5F | 0.6025 | 2 | 6 | 18S rRNA | U | 345 | G | 346 | * | U | 318 | U | 319 | G | 322 | A | 323 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GU*AAGC | 1 |
| UG*UUUCGA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| *AG | 1 |
| *UUCG | 1 |
Release history
| Release | 0.6 |
|---|---|
| Date | 2012-04-02 |
| Status | New id, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in IL_75449.1 | Only in the parent motif |
|---|---|---|---|
| IL_68486.1 Compare | IL_1S72_017 | IL_3U5F_020 | IL_3G78_012 |
Children motifs
| Child motif | Common motif instances | Only in IL_75449.1 | Only in the child motif |
|---|---|---|---|
| IL_53423.1 Compare | IL_3U5F_020 | IL_1S72_017 | |
| IL_74291.1 Compare | IL_1S72_017 | IL_3U5F_020 | IL_2AW7_015 |
- Annotations
-
- (2)
- Basepair signature
- 06_cWW-cWW
- Heat map statistics
- Min 0.60 | Avg 0.30 | Max 0.60
Coloring options: