Motif IL_68486.1 Version IL_68486.1 of this group appears in releases 0.5 to 0.5
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 1-5 | 3-4 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3G78_012 | 3G78 | 0.0000 | 0 | A | Group II catalytic intron D1-D4-1 | C | 296 | A | 297 | U | 298 | * | G | 320 | G | 321 | cWW | cWW |
| 2 | IL_1S72_017 | 1S72 | 0.8994 | 1 | 0 | LSU rRNA | A | 602 | A | 603 | C | 605 | * | G | 554 | U | 555 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CAU*GG | 1 |
| AAGC*GU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| A* | 1 |
| AG* | 1 |
Release history
| Release | 0.5 |
|---|---|
| Date | 2011-12-08 |
| Status | New id, 2 parents |
Parent motifs
| Parent motif | Common motif instances | Only in IL_68486.1 | Only in the parent motif |
|---|---|---|---|
| IL_96669.1 Compare | IL_1S72_017 | IL_3G78_012 | |
| IL_11363.2 Compare | IL_3G78_012 | IL_1S72_017 | IL_2ZJR_055, IL_3F1H_088, IL_2QWY_008, IL_2QWY_005, IL_1O9M_002, IL_2QWY_002, IL_1FJG_046, IL_1O9M_001, IL_1T0E_001, IL_1S72_005, IL_2ZJR_084, IL_2ZJR_044, IL_2ZJR_021, IL_1MWL_003, IL_1MWL_002, IL_1ZX7_007, IL_1ZX7_005, IL_2ZJR_005, IL_1ZX7_003, IL_3MOJ_004, IL_1FJG_012, IL_1S72_079, IL_1ZX7_001, IL_1FJG_057, IL_2O3X_001, IL_2O3X_002, IL_2O3X_003, IL_3F1H_023, IL_3F1H_005 |
Children motifs
| Child motif | Common motif instances | Only in IL_68486.1 | Only in the child motif |
|---|---|---|---|
| IL_80179.1 Compare | IL_3G78_012 | IL_1S72_017 | IL_3U5H_107, IL_2XZM_040, IL_3U5H_078, IL_2XZM_053, IL_4A1B_069, IL_1FJG_012 |
| IL_75449.1 Compare | IL_1S72_017 | IL_3G78_012 | IL_3U5F_020 |
Coloring options: