Motif IL_75461.1 Version IL_75461.1 of this group appears in releases 3.2 to 3.17
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 1-3 | 1-7 | 3-4 | 4-6 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4LFB_052 | 4LFB | 0.9395 | 3 | 180 degree turn | A | SSU rRNA | G | 1255 | A | 1256 | G | 1258 | * | C | 1277 | U | 1278 | A | 1279 | C | 1282 | ncSs | cWW | cWW | |
| 2 | IL_5J7L_055 | 5J7L | 0.0000 | 3 | 180 degree turn | AA | SSU rRNA | G | 1255 | A | 1256 | G | 1258 | * | C | 1277 | G | 1278 | G | 1279 | C | 1282 | cSs | cWW | cWW | |
| 3 | IL_4V88_460 | 4V88 | 0.6928 | 6 | 180 degree turn | A6 | SSU rRNA | G | 1488 | U | 1489 | C | 1494 | * | G | 1513 | U | 1514 | A | 1515 | C | 1518 | cWW | cWW | cSs |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAUG*CUAAUC | 1 |
| GAAG*CGGACC | 1 |
| GUCUAAC*GUAAUC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AU*UAAU | 1 |
| AA*GGAC | 1 |
| UCUAA*UAAU | 1 |
Release history
| Release | 3.3 | 3.4 | 3.5 | 3.6 | 3.7 | 3.8 | 3.9 | 3.10 | 3.2 | 3.11 | 3.12 | 3.13 | 3.14 | 3.15 | 3.16 | 3.17 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2018-03-08 | 2018-04-06 | 2018-05-04 | 2018-06-01 | 2018-06-29 | 2018-07-27 | 2018-08-24 | 2018-09-21 | 2018-09-26 | 2018-10-19 | 2018-11-16 | 2018-12-14 | 2019-01-11 | 2019-02-08 | 2019-03-08 | 2019-04-05 |
| Status | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- 180 degree turn (3)
- Basepair signature
- cWW-tSS-cSS-L-R-cWW
- Heat map statistics
- Min 0.69 | Avg 0.59 | Max 1.02
Coloring options: