Motif IL_79955.1 Version IL_79955.1 of this group appears in releases 0.5 to 0.5
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 11 | 12 | 1-12 | 2-11 | 3-10 | 4-9 | 5-8 | 6-7 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_2AW7_037 | 2AW7 | 0.0000 | 0 | A | 16S ribosomal RNA | A | 673 | G | 674 | A | 675 | A | 676 | U | 677 | U | 678 | * | A | 712 | G | 713 | G | 714 | A | 715 | A | 716 | U | 717 | cWW | cWW | ncWw | cWW | ncWWa | cWW |
| 2 | IL_1FJG_030 | 1FJG | 0.0995 | 0 | A | SSU rRNA | G | 673 | G | 674 | A | 675 | A | 676 | U | 677 | U | 678 | * | A | 712 | G | 713 | G | 714 | A | 715 | A | 716 | C | 717 | cWW | cWW | ncWw | cWW | ncWWa | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AGAAUU*AGGAAU | 1 |
| GGAAUU*AGGAAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GAAU*GGAA | 2 |
Release history
| Release | 0.5 |
|---|---|
| Date | 2011-12-08 |
| Status | New id, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in IL_79955.1 | Only in the parent motif |
|---|---|---|---|
| IL_21031.1 Compare | IL_1FJG_030 | IL_2AW7_037 |
Children motifs
| Child motif | Common motif instances | Only in IL_79955.1 | Only in the child motif |
|---|---|---|---|
| IL_79955.2 Compare | IL_1FJG_030, IL_2AW7_037 | IL_4A1B_025 |
Coloring options: