Motif IL_80287.1 Version IL_80287.1 of this group appears in releases 3.88 to 3.89
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 11 | 1-11 | 2-10 | 3-9 | 5-8 | 6-7 | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_8VTW_062 | 8VTW | 0.0000 | 1 | 1A | LSU rRNA | U | 1540 | G | 1541 | A | 1542 | A | 1544 | A | 1545 | C | 1546 | * | G | 1526 | G | 1527 | A | 1528 | A | 1528|||A | G | 1529 | cWW | tSH | tHH | tHS | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
UGACAAC*GGAAG | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
GACAA*GAA | 1 |
- Annotations
-
- (1)
- Basepair signature
- cWW-tSH-tHH-L-tHS-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: