Motif IL_80714.1 Version IL_80714.1 of this group appears in releases 1.12 to 1.18
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | break | 8 | 9 | 10 | 11 | 12 | 1-12 | 2-11 | 7-8 | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_1MFQ_006 | 1MFQ | 0 | 0 | A | SRP RNA | U | 181 | G | 182 | A | 183 | A | 184 | C | 185 | C | 186 | G | 187 | * | C | 212 | A | 213 | A | 214 | A | 215 | A | 216 | cWW | tSH | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
UGAACCG*CAAAA | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
GAACC*AAA | 1 |
Release history
Release | 1.12 | 1.13 | 1.14 | 1.15 | 1.17 | 1.18 |
---|---|---|---|---|---|---|
Date | 2014-03-01 | 2014-03-29 | 2014-04-27 | 2014-06-20 | 2014-09-04 | 2014-10-07 |
Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
Parent motif | Common motif instances | Only in IL_80714.1 | Only in the parent motif |
---|---|---|---|
IL_22358.1 Compare | IL_1MFQ_006 | IL_4BPP_004 |
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-tSH-L-R-R-L-L-L-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: