Motif IL_83249.1 Version IL_83249.1 of this group appears in releases 2.0 to 2.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 10 | 11 | 1-11 | 2-10 | 3-10 | 4-8 | 6-7 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3JAN_002 | 3JAN | 0.0000 | 0 | 4 | SRP RNA | G | 55 | A | 56 | G | 57 | G | 58 | A | 59 | U | 60 | * | A | 287 | G | 288 | A | 289 | C | 290 | C | 291 | cWW | cWW | ntHS | ncWW | |
| 2 | IL_3JCS_075 | 3JCS | 0.7248 | 0 | 2 | LSU rRNA | U | 343 | G | 344 | C | 345 | C | 346 | A | 348 | C | 349 | * | G | 131 | G | 132 | G | 133 | C | 134 | A | 135 | ncWW | ncWw | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAGGAU*AGACC | 1 |
| UGCCAC*GGGCA | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AGGA*GAC | 1 |
| GCCA*GGC | 1 |
Release history
| Release | 2.0 |
|---|---|
| Date | 2017-04-24 |
| Status | New id, no parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-L-R-R-R-L-L-L-cWW
- Heat map statistics
- Min 0.72 | Avg 0.36 | Max 0.72
Coloring options: