Motif IL_83485.1 Version IL_83485.1 of this group appears in releases 0.1 to 0.5
#S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 1-13 | 2-12 | 3-11 | 5-6 | |||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_2ZJR_051 | 2ZJR | 0 | 0 | Kink-turn (H) | X | LSU rRNA | U | 1426 | G | 1427 | G | 1428 | A | 1429 | G | 1430 | * | C | 1598 | G | 1599 | U | 1600 | U | 1601 | G | 1602 | A | 1603 | A | 1604 | A | 1605 | cWW | tSH | ntSH | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
UGGAG*CGUUGAAA | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
GGA*GUUGAA | 1 |
Release history
Release | 0.1 | 0.2 | 0.3 | 0.4 | 0.5 |
---|---|---|---|---|---|
Date | 2011-12-08 | 2011-12-08 | 2011-12-08 | 2011-12-08 | 2011-12-08 |
Status | New id, no parents | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
Child motif | Common motif instances | Only in IL_83485.1 | Only in the child motif |
---|---|---|---|
IL_82831.1 Compare | IL_2ZJR_051 | IL_2AW7_038, IL_3UXR_084 |
- Annotations
-
- Kink-turn (H) (1)
- Basepair signature
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: