Motif IL_86453.1 Version IL_86453.1 of this group appears in releases 1.14 to 1.14
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 8 | 1-8 | 2-5 | 3-4 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3E5C_001 | 3E5C | 0 | 1 | Isolated non-canonical cWW pair | A | SAM-III riboswitch aptamer (SMK box) | G | 12 | A | 13 | U | 14 | * | A | 27 | G | 28 | A | 29 | G | 31 | C | 32 | cWW | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAU*AGAUGC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| A*GAUG | 1 |
Release history
| Release | 1.14 |
|---|---|
| Date | 2014-04-27 |
| Status | New id, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in IL_86453.1 | Only in the parent motif |
|---|---|---|---|
| IL_24293.1 Compare | IL_3E5C_001 | IL_3V2F_085 |
Children motifs
| Child motif | Common motif instances | Only in IL_86453.1 | Only in the child motif |
|---|---|---|---|
| IL_38207.1 Compare | IL_3E5C_001 | IL_1S72_072 |
- Annotations
-
- Isolated non-canonical cWW pair (1)
- Basepair signature
- cWW-R-R-cWW-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: