Motif IL_87065.1 Version IL_87065.1 of this group appears in releases 1.5 to 1.13
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | break | 3 | 4 | 5 | 1-5 | 2-3 | 4-5 | |||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_2QBG_079 | 2QBG | 0.3095 | 2 | B | 23S rRNA | A | 2054 | G | 2056 | * | C | 2612 | A | 2614 | U | 2615 | cWW | cWW | ncSH | |
| 2 | IL_4A1B_094 | 4A1B | 0.0000 | 2 | 1 | 26S RRNA | G | 2391 | A | 2393 | * | U | 2969 | A | 2970 | C | 2972 | cWW | cWW | ncSH | |
| 3 | IL_3U5H_097 | 3U5H | 0.1065 | 2 | 5 | 25S rRNA | G | 2396 | A | 2398 | * | U | 2981 | A | 2982 | C | 2984 | cWW | cWW | ncSH |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAA*UACC | 2 |
| ACG*CUAU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| A*AC | 2 |
| C*UA | 1 |
Release history
| Release | 1.5 | 1.6 | 1.7 | 1.8 | 1.9 | 1.10 | 1.11 | 1.12 | 1.13 |
|---|---|---|---|---|---|---|---|---|---|
| Date | 2013-08-03 | 2013-08-31 | 2013-09-28 | 2013-11-05 | 2013-12-07 | 2014-01-04 | 2014-02-01 | 2014-03-01 | 2014-03-29 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in IL_87065.1 | Only in the parent motif |
|---|---|---|---|
| IL_46648.2 Compare | IL_4A1B_094, IL_3U5H_097 | IL_2QBG_079 | IL_4A1B_114, IL_3V2F_096, IL_2QBG_098, IL_2XZM_040, IL_3U5H_078, IL_1S72_087, IL_3U5H_117, IL_4IOA_093, IL_2QWY_005 |
| IL_05462.1 Compare | IL_2QBG_079 | IL_4A1B_094, IL_3U5H_097 |
Children motifs
| Child motif | Common motif instances | Only in IL_87065.1 | Only in the child motif |
|---|---|---|---|
| IL_87065.2 Compare | IL_2QBG_079, IL_4A1B_094, IL_3U5H_097 | IL_1VW3_063 |
Coloring options: