#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2break 3 4 51-52-34-5
1 IL_4A1B_0944A1B0.27372126S RRNAG2391A2393*U2969A2970C2972cWWcWWcSH
2 IL_3U5H_0973U5H0.27192525S rRNAG2396A2398*U2981A2982C2984cWWcWWcSH
3 IL_1VW3_0631VW30.00002A21S ribosomal RNAA1954G1956*C2879A2881U2882cWWcWW
4 IL_2QBG_0792QBG0.12352B23S rRNAA2054G2056*C2612A2614U2615cWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GAA*UACC2
ACG*CUAU2
Non-Watson-Crick part of the motif
SequenceCounts
A*AC2
C*UA2

Release history

Release1.14
Date2014-04-27
StatusUpdated, 1 parent

Parent motifs

Parent motifCommon motif instancesOnly in IL_87065.2Only in the parent motif
IL_87065.1
Compare
IL_2QBG_079, IL_4A1B_094, IL_3U5H_097IL_1VW3_063

Children motifs

Child motifCommon motif instancesOnly in IL_87065.2Only in the child motif
IL_87065.3
Compare
IL_2QBG_079, IL_3U5H_097, IL_1VW3_063, IL_4A1B_094IL_4CUV_100
Annotations
  • (4)
  • Basepair signature
    cWW-R-cWW
    Heat map statistics
    Min 0.11 | Avg 0.17 | Max 0.31
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