#SLoop idPDBDisc#Non-coreChain(s)Standardized name for chain 1 2 3 4break 5 6 71-72-63-44-5
1 IL_1S72_0721S720.000000 LSU rRNAG2090G2091G2092G2093*U2652A2653C2654cWWcWWcSHcWW
2 IL_1VWW_1211VWW0.597415 LSU rRNAG3744U3745A3746A3748*U3704G3705C3706ncWWncWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GGGG*UAC1
UGC*GUAAA1
Non-Watson-Crick part of the motif
SequenceCounts
GG*A1
G*UAA1

Release history

Release1.17
Date2014-09-04
StatusNew id, 1 parent

Parent motifs

Parent motifCommon motif instancesOnly in IL_88416.1Only in the parent motif
IL_38207.1
Compare
IL_1S72_072IL_1VWW_121IL_3E5C_001

Children motifs

Child motifCommon motif instancesOnly in IL_88416.1Only in the child motif
IL_84401.1
Compare
IL_1S72_072IL_1VWW_121IL_1VX6_098, IL_3E5C_001
Annotations
  • (2)
  • Basepair signature
    cWW-cWW-cSH-cWW
    Heat map statistics
    Min 0.60 | Avg 0.30 | Max 0.60
    Help

    Coloring options:

    IL_1S72_072:IL_1S72_072 = 0IL_1S72_072:IL_1VWW_121 = 0.5974IL_1VWW_121:IL_1S72_072 = 0.5974IL_1VWW_121:IL_1VWW_121 = 0IL_1S72_072IL_1VWW_121Discrepancy0.000.100.200.300.400.50
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