#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3break 4 5 6 71-72-53-46-7
1 IL_3E5C_0013E5C0.73312Isolated non-canonical cWW pairASMK box (SAM-III) RiboswitchG12A13U14*A27G28G31C32cWWcWWcWW
2 IL_1S72_0721S720.000000 LSU rRNAU2652A2653C2654*G2090G2091G2092G2093cWWcWWcWWcSH
3 IL_1VX6_0981VX60.34240A28S ribosomal RNAU3345A3346C3347*G2684C2685G2686G2687cWWcWWcWWcSH

3D structures

Complete motif including flanking bases
SequenceCounts
GAU*AGAUGC1
UAC*GGGG1
UAC*GCGG1
Non-Watson-Crick part of the motif
SequenceCounts
A*GAUG1
A*GG1
A*CG1
Annotations
  • (2)
  • Isolated non-canonical cWW pair (1)
  • Basepair signature
    cWW-cSW-cSH-cWW-cWW
    Heat map statistics
    Min 0.34 | Avg 0.42 | Max 0.80
    Help

    Coloring options:

    Copyright 2025 BGSU RNA group. Page generated in 0.656 s