#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6 7break 8 9 10 11 12 13 14 151-152-143-124-115-95-106-97-812-13
1 IL_3J79_0253J790.00000A LSU rRNAA827G828A829U830U831U832G833*C861U862U863U864G865C866A867U868cWWtSHntHScHWcWwncwWcWW
2 IL_3J7P_2033J7P0.41711S2 SSU rRNAC1047G1048A1050G1051A1052C1053G1054*C1064G1065U1066C1067G1068U1069A1070G1071cWWntSHncWWcWWcSH

3D structures

Complete motif including flanking bases
SequenceCounts
AGAUUUG*CUUUGCAU1
CGAAGACG*CGUCGUAG1
Non-Watson-Crick part of the motif
SequenceCounts
GAUUU*UUUGCA1
GAAGAC*GUCGUA1

Release history

Release2.0
Date2017-04-24
StatusNew id, no parents

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (2)
  • Basepair signature
    cWW-tSH-cSH-tHS-cHW-cWW-cWW-cWW
    Heat map statistics
    Min 0.42 | Avg 0.21 | Max 0.42
    Help

    Coloring options:

    IL_3J79_025:IL_3J79_025 = 0IL_3J79_025:IL_3J7P_203 = 0.4171IL_3J7P_203:IL_3J79_025 = 0.4171IL_3J7P_203:IL_3J7P_203 = 0IL_3J79_025IL_3J7P_203Discrepancy0.000.100.200.300.40
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