Motif IL_90735.3 Version IL_90735.3 of this group appears in releases 1.18 to 1.18
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | break | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 1-17 | 2-16 | 9-10 | |||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_3J7A_033 | 3J7A | 0.4877 | 0 | A | G | 801 | A | 802 | G | 803 | U | 804 | A | 805 | A | 806 | A | 807 | U | 808 | U | 809 | * | A | 854 | C | 855 | U | 856 | A | 857 | U | 858 | A | 859 | G | 860 | C | 861 | cWW | ncWW | cWW |
| 2 | IL_4W23_037 | 4W23 | 0.0000 | 0 | 2 | G | 807 | A | 808 | A | 809 | A | 810 | A | 811 | A | 812 | A | 813 | U | 814 | U | 815 | * | A | 849 | C | 850 | C | 851 | G | 852 | C | 853 | A | 854 | G | 855 | C | 856 | cWW | cWW | cWW |
| 3 | IL_4BPP_041 | 4BPP | 0.3379 | 0 | A | G | 735 | A | 736 | A | 737 | A | 738 | A | 739 | A | 740 | A | 741 | U | 742 | U | 743 | * | A | 774 | C | 775 | A | 776 | U | 777 | U | 778 | A | 779 | G | 780 | C | 781 | cWW | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAGUAAAUU*ACUAUAGC | 1 |
| GAAAAAAUU*ACCGCAGC | 1 |
| GAAAAAAUU*ACAUUAGC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AGUAAAU*CUAUAG | 1 |
| AAAAAAU*CCGCAG | 1 |
| AAAAAAU*CAUUAG | 1 |
Release history
| Release | 1.18 |
|---|---|
| Date | 2014-10-07 |
| Status | Updated, 1 parent |
Parent motifs
| Parent motif | Common motif instances | Only in IL_90735.3 | Only in the parent motif |
|---|---|---|---|
| IL_90735.2 Compare | IL_3J7A_033, IL_4BPP_041 | IL_4W23_037 | IL_3U5F_042 |
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-cWW-L-R-R-R-R-R-L-L-L-L-L-cWW
- Heat map statistics
- Min 0.34 | Avg 0.30 | Max 0.52
Coloring options: