#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4break 5 6 71-72-64-5
1 IL_1VW3_0141VW30.00001A21S ribosomal RNAA433U434G435A436*U453A455U456cWWtSHcWW
2 IL_4KQY_0054KQY0.83691A SAM-I riboswitchU52G53A55A56*U69G70A71cWWncWBcWW

3D structures

Complete motif including flanking bases
SequenceCounts
AUGA*UAAU1
UGUAA*UGA1
Non-Watson-Crick part of the motif
SequenceCounts
UG*AA1
GUA*G1

Release history

Release1.141.15
Date2014-04-272014-06-20
StatusNew id, 1 parentExact match

Parent motifs

Parent motifCommon motif instancesOnly in IL_90877.1Only in the parent motif
IL_41153.1
Compare
IL_4KQY_005IL_1VW3_014

Children motifs

Child motifCommon motif instancesOnly in IL_90877.1Only in the child motif
IL_82600.1
Compare
IL_4KQY_005IL_1VW3_014IL_4CUX_020, IL_1VWW_035
IL_92986.1
Compare
IL_1VW3_014IL_4KQY_005
Annotations
  • (2)
  • Basepair signature
    cWW-L-R-L-cWW
    Heat map statistics
    Min 0.84 | Avg 0.42 | Max 0.84
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