Motif IL_92541.1 Version IL_92541.1 of this group appears in releases 4.0 to 4.0
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 1-9 | 2-7 | 3-4 | 3-8 | 4-8 | 5-6 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1U6B_003 | 1U6B | 0.1819 | 0 | Receptor of 11-nt loop-receptor motif | B | 197-MER | C | 61 | U | 62 | A | 63 | A | 64 | G | 65 | * | U | 80 | A | 81 | U | 82 | G | 83 | cWW | tWH | cSH | ncWW | cWW | |
| 2 | IL_4PCJ_005 | 4PCJ | 0.1312 | 0 | Receptor of 11-nt loop-receptor motif | A | trCUG-3('5) | C | 8 | U | 9 | A | 10 | A | 11 | G | 12 | * | U | 25 | A | 26 | U | 27 | G | 28 | cWW | tWH | cSH | cWW | cWW | |
| 3 | IL_5VCI_006 | 5VCI | 0.1161 | 0 | Receptor of 11-nt loop-receptor motif | A+B | RNA (22-mer) + RNA (12-mer) | C | 8 | U | 9 | A | 10 | A | 11 | G | 12 | * | U | 2 | A | 3 | U | 4 | G | 5 | cWW | tWH | cSH | cWW | cWW | |
| 4 | IL_5DCV_010 | 5DCV | 0.1228 | 0 | Receptor of 11-nt loop-receptor motif | D | RNA (47-MER) | C | 45 | U | 46 | A | 47 | A | 48 | G | 49 | * | U | 3 | A | 4 | U | 5 | G | 6 | cWW | tWH | cSH | ntSH | cWW | cWW |
| 5 | IL_1U6B_013 | 1U6B | 0.0000 | 0 | Receptor of 11-nt loop-receptor motif | B | 197-MER | C | 147 | U | 148 | A | 149 | A | 150 | G | 151 | * | U | 160 | A | 161 | U | 162 | G | 163 | cWW | tWH | cSH | cWW | cWW | |
| 6 | IL_3IGI_012 | 3IGI | 0.1069 | 0 | Receptor of 11-nt loop-receptor motif | A | Group IIC intron | C | 346 | U | 347 | A | 348 | A | 349 | G | 350 | * | U | 332 | A | 333 | U | 334 | G | 335 | cWW | tWH | cSH | ncWW | cWW | |
| 7 | IL_2R8S_007 | 2R8S | 0.1985 | 0 | Receptor of 11-nt loop-receptor motif | R | P4-P6 RNA RIBOZYME DOMAIN | C | 223 | U | 224 | A | 225 | A | 226 | G | 227 | * | U | 247 | A | 248 | U | 249 | G | 250 | cWW | tWH | cSH | cWW | ||
| 8 | IL_5BTM_002 | 5BTM | 0.2097 | 0 | Receptor of 11-nt loop-receptor motif | A | RNA (55-mer) | C | 19 | U | 20 | A | 21 | A | 22 | G | 23 | * | U | 34 | A | 35 | U | 36 | G | 37 | cWW | tWH | cSH | cWW | ||
| 9 | IL_6WPI_002 | 6WPI | 0.1951 | 0 | Receptor of 11-nt loop-receptor motif | B | RNA (47-MER) | C | 18 | U | 19 | A | 20 | A | 21 | G | 22 | * | U | 33 | A | 34 | U | 35 | G | 36 | cWW | tWH | cSH | cWW | ||
| 10 | IL_5Y7M_005 | 5Y7M | 0.2137 | 0 | Receptor of 11-nt loop-receptor motif | D | RNA (52-MER) | C | 46 | U | 47 | A | 48 | A | 49 | G | 50 | * | U | 3 | A | 4 | U | 5 | G | 6 | cWW | tWH | cSH | cWW | ||
| 11 | IL_1NBS_008 | 1NBS | 0.2233 | 0 | Receptor of 11-nt loop-receptor motif | B | RNase P class B | C | 146 | U | 147 | A | 148 | C | 149 | G | 150 | * | U | 159 | A | 160 | U | 161 | G | 162 | cWW | tWH | ncSH | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUAAG*UAUG | 10 |
| CUACG*UAUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAA*AU | 10 |
| UAC*AU | 1 |
Release history
| Release | 4.0 |
|---|---|
| Date | 2025-08-13 |
| Status | New id, 2 parents |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Receptor of 11-nt loop-receptor motif (11)
- Basepair signature
- cWW-tWH-R-cSH-cWW
- Heat map statistics
- Min 0.07 | Avg 0.18 | Max 0.29
Coloring options: