Motif IL_92634.2 Version IL_92634.2 of this group appears in releases 3.95 to 3.97
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 1-7 | 4-5 | 5-6 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4V9F_009 | 4V9F | 0.2303 | 1 | 0 | LSU rRNA | C | 260 | A | 261 | A | 262 | G | 264 | U | 265 | * | A | 248 | G | 249 | cWW | cWW | |
| 2 | IL_8CRE_007 | 8CRE | 0.0000 | 1 | 1 | LSU rRNA | A | 143 | G | 144 | U | 145 | G | 147 | U | 148 | * | A | 122 | U | 123 | cWW | cWW | |
| 3 | IL_8P9A_236 | 8P9A | 0.0610 | 1 | AR | LSU rRNA | A | 144 | G | 145 | U | 146 | G | 148 | U | 149 | * | A | 123 | U | 124 | cWW | cSH | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AGUUGU*AU | 2 |
| CAAUGU*AG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GUUG* | 2 |
| AAUG* | 1 |
- Annotations
-
- (3)
- Basepair signature
- cWW-L-cWW-L-L
- Heat map statistics
- Min 0.06 | Avg 0.12 | Max 0.24
Coloring options: