#SLoop idPDBDisc#Non-coreAnnotationChain(s)Standardized name 1 2 3 4 5 6 7break 8 9 10 11 12 13 141-142-133-124-55-106-97-8
1 IL_5TBW_0385TBW0.184307x7 Sarcin-Ricin with intercalated A; G-bulge1 LSU rRNAG991A992G993G994U995A996A997*U1052A1053A1054A1055U1056A1057U1058cWWcwWcWBcSHtWHtHScWW
2 IL_4WF9_0314WF90.000007x7 Sarcin-Ricin with intercalated A; G-bulgeX LSU rRNAG901A902G903G904U905A906G907*C960G961A962A963U964G965C966cWWcWWncWBcSHtWHtHScWW
3 IL_5J7L_2705J7L0.151307x7 Sarcin-Ricin with intercalated A; G-bulgeDA LSU rRNAG856G857G858G859U860A861G862*C915G916A917A918U919A920C921cWWcWWcWBcSHtWHtHScWW

3D structures

Complete motif including flanking bases
SequenceCounts
GAGGUAA*UAAAUAU1
GAGGUAG*CGAAUGC1
GGGGUAG*CGAAUAC1
Non-Watson-Crick part of the motif
SequenceCounts
AGGUA*AAAUA1
AGGUA*GAAUG1
GGGUA*GAAUA1

Release history

Release3.33.43.53.63.73.83.93.103.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.763.773.783.79
Date2018-03-082018-04-062018-05-042018-06-012018-06-292018-07-272018-08-242018-09-212018-10-192018-11-162018-12-142019-01-112019-02-082019-03-082019-04-052019-05-032019-05-312019-06-282019-07-262019-08-232019-09-192019-10-162019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-172022-10-122022-11-092022-12-072023-01-042023-02-012023-03-012023-03-292023-04-262023-05-242023-06-212023-07-192023-08-162023-09-132023-10-112023-11-082023-12-062024-01-032024-01-03
StatusUpdated, 1 parentExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • 7x7 Sarcin-Ricin with intercalated A; G-bulge (3)
  • Basepair signature
    cWW-cWW-bif-R-cSH-tWH-tHS-cWW
    Heat map statistics
    Min 0.15 | Avg 0.12 | Max 0.21
    Help

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