#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4break 5 6 71-73-64-5
1 IL_3BNL_0033BNL0.00000A+BA site of bacterial ribosomeG15A16A17G18*C6A7C8cWWcWwcWW
2 IL_2GDI_0012GDI0.96700XTPP riboswitchA45U46A47C48*G18G19U20cWWcWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GAAG*CAC1
AUAC*GGU1
Non-Watson-Crick part of the motif
SequenceCounts
AA*A1
UA*G1

Release history

Release1.101.11
Date2014-01-042014-02-01
StatusNew id, 2 parentsExact match

Parent motifs

Parent motifCommon motif instancesOnly in IL_95884.1Only in the parent motif
IL_19898.1
Compare
IL_3BNL_003IL_2GDI_001IL_1LNG_001
IL_75447.1
Compare
IL_2GDI_001IL_3BNL_003IL_2GDI_005, IL_3BNL_002

Children motifs

Child motifCommon motif instancesOnly in IL_95884.1Only in the child motif
IL_12024.1
Compare
IL_3BNL_003IL_2GDI_001IL_1LNG_001
IL_31039.1
Compare
IL_2GDI_001IL_3BNL_003IL_2GDI_005
Annotations
  • (2)
  • Basepair signature
    cWW-L-cWW-cWW
    Heat map statistics
    Min 0.97 | Avg 0.48 | Max 0.97
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