Motif IL_75447.1 Version IL_75447.1 of this group appears in releases 0.7 to 1.9
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 6 | 1-6 | 2-5 | 3-4 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_2GDI_001 | 2GDI | 0.0459 | 1 | X | TPP riboswitch | G | 18 | G | 19 | U | 20 | * | A | 45 | A | 47 | C | 48 | cWW | cWW | cWW | |
| 2 | IL_2GDI_005 | 2GDI | 0.0000 | 1 | Y | TPP riboswitch | G | 18 | G | 19 | U | 20 | * | A | 45 | A | 47 | C | 48 | cWW | cWW | cWW | |
| 3 | IL_3BNL_002 | 3BNL | 0.6825 | 1 | A+B | A site of bacterial ribosome | C | 6 | A | 7 | C | 8 | * | G | 15 | A | 17 | G | 18 | cWW | cwW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GGU*AUAC | 2 |
| CAC*GAAG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| G*UA | 2 |
| A*AA | 1 |
Release history
| Release | 0.7 | 0.8 | 0.9 | 0.10 | 0.11 | 0.12 | 1.0 | 1.1 | 1.2 | 1.3 | 1.4 | 1.5 | 1.6 | 1.7 | 1.8 | 1.9 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-03-04 | 2013-04-08 | 2013-05-04 | 2013-06-01 | 2013-07-01 | 2013-08-03 | 2013-08-31 | 2013-09-28 | 2013-11-05 | 2013-12-07 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in IL_75447.1 | Only in the parent motif |
|---|---|---|---|
| IL_78157.1 Compare | IL_2GDI_005, IL_2GDI_001, IL_3BNL_002 | IL_2Y9B_005, IL_2Y9B_008 |
Children motifs
| Child motif | Common motif instances | Only in IL_75447.1 | Only in the child motif |
|---|---|---|---|
| IL_70173.1 Compare | IL_3BNL_002 | IL_2GDI_005, IL_2GDI_001 | IL_4A1B_081, IL_3U5F_093, IL_3U5H_085, IL_4M4O_004, IL_4M6D_013 |
| IL_95884.1 Compare | IL_2GDI_001 | IL_2GDI_005, IL_3BNL_002 | IL_3BNL_003 |
| IL_91956.1 Compare | IL_2GDI_005 | IL_2GDI_001, IL_3BNL_002 |
Coloring options: