Motif IL_95980.1 Version IL_95980.1 of this group appears in releases 1.6 to 1.11
#S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 8 | 1-8 | 2-5 | 3-4 | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_3E5C_001 | 3E5C | 0 | 1 | Isolated non-canonical cWW | A | SMK box (SAM-III) Riboswitch | G | 12 | A | 13 | U | 14 | * | A | 27 | G | 28 | A | 29 | G | 31 | C | 32 | cWW | cWW | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
GAU*AGAUGC | 1 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
A*GAUG | 1 |
Release history
Release | 1.6 | 1.7 | 1.8 | 1.9 | 1.10 | 1.11 |
---|---|---|---|---|---|---|
Date | 2013-08-31 | 2013-09-28 | 2013-11-05 | 2013-12-07 | 2014-01-04 | 2014-02-01 |
Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
Parent motif | Common motif instances | Only in IL_95980.1 | Only in the parent motif |
---|---|---|---|
IL_35595.1 Compare | IL_3E5C_001 | IL_3V2F_085 |
Children motifs
Child motif | Common motif instances | Only in IL_95980.1 | Only in the child motif |
---|---|---|---|
IL_24293.1 Compare | IL_3E5C_001 | IL_3V2F_085 |
- Annotations
-
- Isolated non-canonical cWW (1)
- Basepair signature
- cWW-R-R-cWW-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: