Motif IL_97601.6 Version IL_97601.6 of this group appears in releases 3.32 to 3.76
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 1-8 | 2-7 | 3-4 | 3-5 | 4-7 | 5-6 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_5T83_002 | 5T83 | 0.8802 | 0 | 8-nt loop receptor | A | Guanidine-I riboswitch | G | 16 | G | 17 | U | 18 | U | 19 | C | 20 | * | G | 39 | U | 40 | C | 41 | cWW | ncWB | cSH | ncSH | cWW | |
| 2 | IL_5U3G_002 | 5U3G | 0.8623 | 0 | 8-nt loop receptor | B | Guanidine-I riboswitch | G | 10 | G | 11 | U | 12 | U | 13 | C | 14 | * | G | 27 | U | 28 | C | 29 | cWW | cWB | cSH | ncWw | cWW | |
| 3 | IL_5Y7M_005 | 5Y7M | 0.1031 | 1 | Receptor of 11-nt loop-receptor motif | D | RNA (52-MER) | C | 46 | U | 47 | A | 48 | A | 49 | G | 50 | * | U | 3 | A | 4 | G | 6 | cWW | tWH | cSH | cWW | ||
| 4 | IL_6AZ4_002 | 6AZ4 | 0.1004 | 1 | Receptor of 11-nt loop-receptor motif | A | RNA (32-MER) | C | 13 | U | 14 | A | 15 | A | 16 | G | 17 | * | U | 28 | A | 29 | G | 31 | cWW | tWH | cSH | cWW | ||
| 5 | IL_5M0H_003 | 5M0H | 0.0718 | 1 | Receptor of 11-nt loop-receptor motif | A | ASH1 E3 (42 nt-TL/TLR) | C | 14 | U | 15 | A | 16 | A | 17 | G | 18 | * | U | 29 | A | 30 | G | 32 | cWW | tWH | cSH | cWW | ||
| 6 | IL_6WPI_002 | 6WPI | 0.0879 | 1 | Receptor of 11-nt loop-receptor motif | B | RNA (47-MER) | C | 18 | U | 19 | A | 20 | A | 21 | G | 22 | * | U | 33 | A | 34 | G | 36 | cWW | tWH | cSH | cWW | ||
| 7 | IL_5XTM_001 | 5XTM | 0.0642 | 1 | Receptor of 11-nt loop-receptor motif | B | RNA (47-MER) | C | 41 | U | 42 | A | 43 | A | 44 | G | 45 | * | U | 3 | A | 4 | G | 6 | cWW | tWH | cSH | cWW | ||
| 8 | IL_4K27_004 | 4K27 | 0.0000 | 1 | Receptor of 11-nt loop-receptor motif | U | Myotonic Dystrophy Type 2 RNA | C | 19 | U | 20 | A | 21 | A | 22 | G | 23 | * | U | 34 | A | 35 | G | 37 | cWW | tWH | cSH | cWW | ||
| 9 | IL_5BTM_002 | 5BTM | 0.0508 | 1 | Receptor of 11-nt loop-receptor motif | A | RNA (55-mer) | C | 19 | U | 20 | A | 21 | A | 22 | G | 23 | * | U | 34 | A | 35 | G | 37 | cWW | tWH | cSH | cWW | ||
| 10 | IL_6DVK_001 | 6DVK | 0.0889 | 1 | Receptor of 11-nt loop-receptor motif | H | RNA (95-MER) | C | 85 | U | 86 | A | 87 | A | 88 | G | 89 | * | U | 6 | A | 7 | G | 9 | cWW | tWH | cSH | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUAAG*UAUG | 8 |
| GGUUC*GUC | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAA*AU | 8 |
| GUU*U | 2 |
Release history
| Release | 3.32 | 3.33 | 3.34 | 3.35 | 3.36 | 3.37 | 3.38 | 3.39 | 3.40 | 3.41 | 3.42 | 3.43 | 3.44 | 3.45 | 3.46 | 3.47 | 3.48 | 3.49 | 3.50 | 3.51 | 3.52 | 3.53 | 3.54 | 3.55 | 3.56 | 3.57 | 3.58 | 3.59 | 3.60 | 3.61 | 3.62 | 3.63 | 3.64 | 3.65 | 3.66 | 3.67 | 3.68 | 3.69 | 3.70 | 3.71 | 3.72 | 3.73 | 3.74 | 3.75 | 3.76 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2020-05-27 | 2020-06-24 | 2020-07-22 | 2020-08-19 | 2020-09-16 | 2020-10-14 | 2020-11-11 | 2020-12-09 | 2021-01-06 | 2021-02-03 | 2021-03-03 | 2021-03-31 | 2021-04-28 | 2021-05-26 | 2021-06-23 | 2021-07-21 | 2021-08-18 | 2021-09-15 | 2021-10-13 | 2021-11-10 | 2021-12-08 | 2022-01-05 | 2022-02-02 | 2022-03-02 | 2022-03-30 | 2022-04-27 | 2022-05-25 | 2022-06-22 | 2022-07-20 | 2022-08-17 | 2022-10-12 | 2022-11-09 | 2022-12-07 | 2023-01-04 | 2023-02-01 | 2023-03-01 | 2023-03-29 | 2023-04-26 | 2023-05-24 | 2023-06-21 | 2023-07-19 | 2023-08-16 | 2023-09-13 | 2023-10-11 | 2023-11-08 |
| Status | Updated, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- Receptor of 11-nt loop-receptor motif (8)
- 8-nt loop receptor (2)
- Basepair signature
- cWW-tWH-cSH-cWW
- Heat map statistics
- Min 0.05 | Avg 0.33 | Max 0.90
Coloring options: