Motif IL_97842.1 Version IL_97842.1 of this group appears in releases 0.6 to 1.18

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Pairwise interactions
Sequence variants
History

#S	Loop id	PDB	Disc	#Non-core	Chain(s)	Standardized name		1		2		3		4		5		6	break		7		8		9		10		11		12		13		14		15		16	1-16	2-11	4-9	5-8	6-7
1	IL_3U5H_011	3U5H	0	0	5	25S rRNA	U	169	G	170	G	171	G	172	G	173	C	174	*	G	244	U	245	U	246	C	247	U	248	U	249	U	250	G	251	U	252	A	253	ncWW	ncWB	ncWW	ncWW	cWW

3D structures

Complete motif including flanking bases

Sequence	Counts
UGGGGC*GUUCUUUGUA	1

Non-Watson-Crick part of the motif

Sequence	Counts
GGGG*UUCUUUGU	1

Release history

Release	0.6	0.7	0.8	0.9	0.10	0.11	0.12	1.0	1.1	1.2	1.3	1.4	1.5	1.6	1.7	1.8	1.9	1.10	1.11	1.12	1.13	1.14	1.15	1.17	1.18
Date	2012-04-02	2013-02-17	2013-02-17	2013-02-17	2013-02-17	2013-02-17	2013-02-17	2013-03-04	2013-04-08	2013-05-04	2013-06-01	2013-07-01	2013-08-03	2013-08-31	2013-09-28	2013-11-05	2013-12-07	2014-01-04	2014-02-01	2014-03-01	2014-03-29	2014-04-27	2014-06-20	2014-09-04	2014-10-07
Status	New id, no parents	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match	Exact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.

Annotations: (1)
Basepair signature: cWW-R-R-R-R-cWS-cWW-cWW-L-R-cWW
Heat map statistics: Min 0.00 | Avg 0.00 | Max 0.00

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Coloring options: Nucleotide numbers

Motif IL_97842.1 Version IL_97842.1 of this group appears in releases 0.6 to 1.18 Download Csv Json

3D structures

Complete motif including flanking bases

Non-Watson-Crick part of the motif

Release history

Parent motifs

Children motifs

Motif IL_97842.1 Version IL_97842.1 of this group appears in releases 0.6 to 1.18

Download

Csv

Json