Motif IL_98566.1 Version IL_98566.1 of this group appears in releases 0.5 to 1.14
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | break | 4 | 5 | 6 | 7 | 8 | 1-8 | 2-5 | 3-4 | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_1S72_044 | 1S72 | 0.0000 | 2 | 0 | LSU rRNA | G | 1163 | A | 1166 | G | 1167 | * | C | 1179 | U | 1180 | A | 1181 | C | 1182 | C | 1183 | ncWW | ncWW | cWW | |
| 2 | IL_2QBG_013 | 2QBG | 0.9296 | 0 | B | 23S rRNA | C | 269 | A | 270 | G | 271 | * | C | 366 | G | 367 | A | 368 | U | 369 | G | 370 | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GUGAG*CUACC | 1 |
| CAG*CGAUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UGA*UAC | 1 |
| A*GAU | 1 |
Release history
| Release | 0.5 | 0.6 | 0.7 | 0.8 | 0.9 | 0.10 | 0.11 | 0.12 | 1.0 | 1.1 | 1.2 | 1.3 | 1.4 | 1.5 | 1.6 | 1.7 | 1.8 | 1.9 | 1.10 | 1.11 | 1.12 | 1.13 | 1.14 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2011-12-08 | 2012-04-02 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-03-04 | 2013-04-08 | 2013-05-04 | 2013-06-01 | 2013-07-01 | 2013-08-03 | 2013-08-31 | 2013-09-28 | 2013-11-05 | 2013-12-07 | 2014-01-04 | 2014-02-01 | 2014-03-01 | 2014-03-29 | 2014-04-27 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in IL_98566.1 | Only in the parent motif |
|---|---|---|---|
| IL_29499.1 Compare | IL_1S72_044 | IL_2QBG_013 |
Children motifs
| Child motif | Common motif instances | Only in IL_98566.1 | Only in the child motif |
|---|---|---|---|
| IL_99784.1 Compare | IL_2QBG_013 | IL_1S72_044 | |
| IL_70089.1 Compare | IL_1S72_044 | IL_2QBG_013 | IL_4CUV_062, IL_3U5H_060 |
- Annotations
- Basepair signature
- cWW-L-R-R-R-cWW
- Heat map statistics
- Min 0.93 | Avg 0.46 | Max 0.93
Coloring options: