Motif IL_99397.1 Version IL_99397.1 of this group appears in releases 1.10 to 1.13
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | break | 7 | 8 | 9 | 1-9 | 2-6 | 6-7 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_4BPP_006 | 4BPP | 0 | 0 | A | 18S RRNA | U | 57 | G | 58 | C | 59 | C | 60 | A | 61 | G | 62 | * | C | 83 | U | 84 | G | 85 | cWW | cWH | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UGCCAG*CUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GCCA*U | 1 |
Release history
| Release | 1.10 | 1.11 | 1.12 | 1.13 |
|---|---|---|---|---|
| Date | 2014-01-04 | 2014-02-01 | 2014-03-01 | 2014-03-29 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in IL_99397.1 | Only in the parent motif |
|---|---|---|---|
| IL_68880.1 Compare | IL_4BPP_006 | IL_3U5F_006 |
Children motifs
| Child motif | Common motif instances | Only in IL_99397.1 | Only in the child motif |
|---|---|---|---|
| IL_71837.1 Compare | IL_4BPP_006 | IL_2QBG_040, IL_4A1C_001, IL_3U5F_006, IL_3U5H_085, IL_1S72_062, IL_4A1B_081, IL_4IOA_037 |
- Annotations
-
- (1)
- Basepair signature
- cWW-R-cWW-cWH-L-L-L-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: