#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6break 7 8 9break 10 11 12 131-132-52-124-86-78-119-10
1 J3_5J7L_0495J7L0.31692DB 5S rRNAG10C11C12G13A15G16*C68G69C70*G106G107A109C110cWWntsSncSWntSScWWtHScWW
2 J3_7A0S_0147A0S0.00002Y 5S rRNAC12C13C14A15A17G18*C70G71C72*G109U110A112G113cWWncSWtSscWWncWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GCCGUAG*CGC*GGAAC1
CCCAUAG*CGC*GUCAG1
Non-Watson-Crick part of the motif
SequenceCounts
CCGUA*G*GAA1
CCAUA*G*UCA1

Release history

Release3.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.763.773.783.793.803.813.823.833.843.853.863.87
Date2021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-172022-10-122022-11-092022-12-072023-01-042023-02-012023-03-012023-03-292023-04-262023-05-242023-06-212023-07-192023-08-162023-09-132023-10-112023-11-082023-12-062024-01-032024-01-032024-01-312024-02-282024-03-272024-04-242024-05-222024-06-192024-07-172024-08-14
StatusNew id, 1 parentExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (2)
  • Basepair signature
    cWW-F-F-tSS-F-F-cWW-cWW
    Heat map statistics
    Min 0.32 | Avg 0.16 | Max 0.32
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