#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4break 5 6 7 8break 9 101-102-94-57-108-9
1 J3_6CZR_0796CZR0.548001a SSU rRNAU1066G1067U1068U1069*G1082C1083A1084A1085*U1056G1057cWWntSHncWWantSscWW
2 J3_4LFB_0174LFB0.50260A SSU rRNAU1083G1084U1085U1086*G1099C1100A1101A1102*U1073G1074cWWcWWatSscWW
3 J3_4V88_0824V880.00001A6 SSU rRNAU1303G1304U1305C1306*G1318A1319A1321A1322*U1293G1294cWWcWWtSscWW
4 J3_8C3A_0858C3A0.28841CM SSU rRNAU1288G1289U1290C1291*G1303A1304A1306A1307*U1278G1279cWWntSHcWWntSscWW
5 J3_5J7L_0095J7L0.40482AA SSU rRNAU1083G1084U1085G1087*C1098G1099A1101A1102*U1073G1074cWWcWWtSscWW

3D structures

Complete motif including flanking bases
SequenceCounts
UG*UGUU*GCAA2
UG*UGUC*GAUAA2
UG*UGUUG*CGCAA1
Non-Watson-Crick part of the motif
SequenceCounts
*GU*CA2
*GU*AUA2
*GUU*GCA1

Release history

Release3.88
Date2024-09-11
StatusNew id, 1 parent

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (5)
  • Basepair signature
    cWW-tSS-F-cWW-F-cWW-F
    Heat map statistics
    Min 0.15 | Avg 0.40 | Max 0.69
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