#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5break 6 7break 8 91-93-75-67-8
1 J3_5TBW_0455TBW0.08071AS 5S rRNAC9C10A11A13U14*A66G67*U111G112cWWtSscWWcWW
2 J3_8C3A_0598C3A0.000013 5S rRNAC9C10A11A13U14*A66G67*U111G112cWWtSscWWcWW
3 J3_1UN6_0021UN60.16921F5S RIBOSOMAL RNAC9C10A11A13C14*G65G66*U109G110cWWtSscWWcWW
4 J3_8VTW_0478VTW0.337321B 5S rRNAC11C12A13A15G16*C68G69*U108G110cWWtSscWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
CCAUAU*AG*UG2
CCACAC*GG*UG1
CCAUAG*CG*UCG1
Non-Watson-Crick part of the motif
SequenceCounts
CAUA**2
CACA**1
CAUA**C1

Release history

Release3.883.89
Date2024-09-112024-10-09
StatusNew id, 1 parentExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (4)
  • Basepair signature
    cWW-F-cWW-tSS-F-cWW
    Heat map statistics
    Min 0.08 | Avg 0.18 | Max 0.35
    Help

    Coloring options:

    Copyright 2025 BGSU RNA group. Page generated in 1.0545 s