#SLoop idPDBDisc#Non-coreChain(s) 1 2 3break 4 5 6 7 8 9break 10 11 12 13 14break 15 16 171-121-172-163-45-126-117-89-1013-1614-15
1 J4_4LFB_0024LFB0.00000AG142A143G144*C178A179U180G181U182G183*C194A195A196A197G198*C219G220C221tsScWWcWWcWWtWHtWHcSHcWWtSscWW
2 J4_6CZR_0126CZR0.165201aG137A138G139*C173A174U175G176U177G178*C201A202A203A204G205*C215G216C217tsSncWWcWWcWWntWHntWHcWWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GAG*CAUGUG*CAAAG*CGC2
Non-Watson-Crick part of the motif
SequenceCounts
A*AUGU*AAA*G2

Release history

Release3.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.763.773.783.793.803.813.823.833.843.853.863.873.883.893.903.913.923.933.943.95
Date2019-05-032019-05-312019-06-282019-07-262019-08-232019-09-192019-10-162019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-172022-09-142022-10-122022-11-092022-12-072023-01-042023-02-012023-03-012023-03-292023-04-262023-05-242023-06-212023-07-192023-08-162023-09-132023-10-112023-11-082023-12-062024-01-032024-01-312024-02-282024-03-272024-04-242024-05-222024-06-192024-07-172024-08-142024-09-112024-10-092024-11-062024-12-042025-01-012025-01-292025-02-262025-03-26
StatusNew id, 1 parentExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (2)
  • Basepair signature
    cWW-tSS-cWW-cWW-cWW-tWH-tWH-F-cWW-F
    Heat map statistics
    Min 0.17 | Avg 0.08 | Max 0.17
    Help

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