#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2break 3 4break 5 6 7 8 9break 10 11 12 13 14 151-152-34-56-147-138-119-10
1 J4_4IOA_0064IOA0.00001X LSU rRNAA1458G1460*U1481U1482*G1541G1542G1543A1544G1545*C1558G1559A1560A1561G1562U1563cWWcWWcWWncwWtSHtHScWW

3D structures

Complete motif including flanking bases
SequenceCounts
AUG*UU*GGGAG*CGAAGU1
Non-Watson-Crick part of the motif
SequenceCounts
U**GGA*GAAG1

Release history

Release3.23.33.43.53.63.73.83.93.103.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.47
Date2018-02-092018-03-082018-04-062018-05-042018-06-012018-06-292018-07-272018-08-242018-09-212018-10-192018-11-162018-12-142019-01-112019-02-082019-03-082019-04-052019-05-032019-05-312019-06-282019-07-262019-08-232019-09-192019-10-162019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-21
StatusNew id, no parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (1)
  • Basepair signature
    cWW-tSH-F-tHS-F-F-cWW-cWW-cWW
    Heat map statistics
    Min 0.00 | Avg 0.00 | Max 0.00
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