#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4break 5 6 7break 8 9 10 11 12break 13 14 151-154-56-97-811-1412-13
1 J4_4WF9_0094WF90.16180X LSU rRNAG2670A2671G2672C2673*G2701A2702C2703*G2758G2759A2760C2761G2762*C2796C2797C2798cWWcWWcWWcWWtHScWW
2 J4_5J7L_0285J7L0.00000DA LSU rRNAG2643G2644G2645C2646*G2674A2675C2676*G2731G2732A2733A2734G2735*U2769G2770C2771cWWcWWcWWcWWtHScWW
3 J4_4Y4O_0234Y4O0.124002A LSU rRNAG2643G2644G2645C2646*G2674A2675C2676*G2731G2732A2733A2734G2735*C2769G2770C2771cWWcWWcWWcWWtHScWW

3D structures

Complete motif including flanking bases
SequenceCounts
GAGC*GAC*GGACG*CCC1
GGGC*GAC*GGAAG*UGC1
GGGC*GAC*GGAAG*CGC1
Non-Watson-Crick part of the motif
SequenceCounts
GG*A*GAA*G2
AG*A*GAC*C1

Release history

Release3.23.33.43.53.63.73.83.93.103.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.53
Date2018-02-092018-03-082018-04-062018-05-042018-06-012018-06-292018-07-272018-08-242018-09-212018-10-192018-11-162018-12-142019-01-112019-02-082019-03-082019-04-052019-05-032019-05-312019-06-282019-07-262019-08-232019-09-192019-10-162019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-05
StatusNew id, no parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (3)
  • Basepair signature
    cWW-cWW-F-cWW-tHS-cWW-F-F-cWW
    Heat map statistics
    Min 0.12 | Avg 0.10 | Max 0.16
    Help

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