#SLoop idPDBDisc#Non-coreChain(s)Standardized name for chain 1 2 3 4break 5 6 7 8break 9 10break 11 12 13break 14 15 16 17 181-182-173-164-58-910-1112-1512-1613-14
1 J5_3D0U_0013D0U0.00001ALysine riboswitchG6A7G8G9*C76G77A78A79*U110G111*U137G138U139*G150A151G152G154C155cWWcWWtHWcWWcWWcWWcWWtSHcWW
2 J5_3DIL_0013DIL0.08241ALysine riboswitchG9A10G11G12*C79G80A81A82*U113G114*U140G141U142*G161A162G163G165C166cWWcWWtHWcWWcWWcWWcWWtSHcWW

3D structures

Complete motif including flanking bases
SequenceCounts
GAGG*CGAA*UG*UGU*GAGAGC2
Non-Watson-Crick part of the motif
SequenceCounts
AG*GA**G*AGAG2

Release history

Release3.23.33.43.53.63.73.83.93.103.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.613.623.633.643.653.663.673.683.693.703.713.723.733.743.753.763.773.783.793.803.813.823.833.843.853.863.873.883.893.903.913.923.933.943.953.963.973.983.994.04.14.24.34.44.54.64.7
Date2018-02-092018-03-082018-04-062018-05-042018-06-012018-06-292018-07-272018-08-242018-09-212018-10-192018-11-162018-12-142019-01-112019-02-082019-03-082019-04-052019-05-032019-05-312019-06-282019-07-262019-08-232019-09-192019-10-162019-11-132019-12-112020-01-082020-02-052020-03-042020-04-012020-04-292020-05-272020-06-242020-07-222020-08-192020-09-162020-10-142020-11-112020-12-092021-01-062021-02-032021-03-032021-03-312021-04-282021-05-262021-06-232021-07-212021-08-182021-09-152021-10-132021-11-102021-12-082022-01-052022-02-022022-03-022022-03-302022-04-272022-05-252022-06-222022-07-202022-08-172022-09-142022-10-122022-11-092022-12-072023-01-042023-02-012023-03-012023-03-292023-04-262023-05-242023-06-212023-07-192023-08-162023-09-132023-10-112023-11-082023-12-062024-01-032024-01-312024-02-282024-03-272024-04-242024-05-222024-06-192024-07-172024-08-142024-09-112024-10-092024-11-062024-12-042025-01-012025-01-292025-02-262025-03-262025-04-232025-05-212025-06-182025-07-162025-08-132025-09-102025-10-082025-11-052025-12-032025-12-312026-01-282026-02-25
StatusNew id, no parentsExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (2)
  • Basepair signature
    cWW-cWW-tHS-tWH-cWW-cWW-cWW-cWW-F-F-cWW
    Heat map statistics
    Min 0.08 | Avg 0.04 | Max 0.08
    Help

    Coloring options:

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