1F7G Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_1F7G_001 | 1/A/12:17 | No text annotation | geometric HL_5U3G_001 HL_75660.7 | |
| HL_1F7G_002 | 2/A/12:17 | No text annotation | ||
| HL_1F7G_003 | 3/A/12:17 | No text annotation | geometric HL_8HNT_002 HL_56676.1 | |
| HL_1F7G_004 | 4/A/12:17 | No text annotation | geometric HL_5J7L_025 NA | |
| HL_1F7G_005 | 5/A/12:17 | No text annotation | geometric HL_8HNT_002 HL_56676.1 | |
| HL_1F7G_006 | 6/A/12:17 | No text annotation | geometric HL_8HNT_002 HL_56676.1 | |
| HL_1F7G_007 | 7/A/12:17 | No text annotation | ||
| HL_1F7G_008 | 8/A/12:17 | GNRA | geometric HL_4LFB_022 HL_34789.3 | |
| HL_1F7G_009 | 9/A/12:17 | No text annotation | geometric HL_8HNT_002 HL_56676.1 | |
| HL_1F7G_010 | 10/A/12:17 | No text annotation | geometric HL_8HNT_002 HL_56676.1 | |
| HL_1F7G_011 | 11/A/12:17 | No text annotation | geometric HL_4V88_197 NA | |
| HL_1F7G_012 | 12/A/12:17 | No text annotation | ||
| HL_1F7G_013 | 13/A/12:17 | No text annotation | geometric HL_5U3G_001 HL_75660.7 | |
| HL_1F7G_014 | 14/A/12:17 | No text annotation | ||
| HL_1F7G_015 | 15/A/12:17 | GNRA related | geometric HL_5J7L_179 NA | |
| HL_1F7G_016 | 16/A/12:17 | No text annotation | geometric HL_7RQB_011 NA | |
| HL_1F7G_017 | 17/A/12:17 | No text annotation | geometric HL_5NFV_001 HL_69752.4 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_1F7G_001 | 1/A/6:8, 1/A/21:22 | No text annotation | ||
| IL_1F7G_021 | 2/A/6:8, 2/A/21:22 | No text annotation | ||
| IL_1F7G_003 | 3/A/6:8, 3/A/21:22 | No text annotation | ||
| IL_1F7G_004 | 4/A/6:8, 4/A/21:22 | No text annotation | ||
| IL_1F7G_022 | 5/A/6:8, 5/A/21:22 | No text annotation | ||
| IL_1F7G_006 | 6/A/6:8, 6/A/21:22 | No text annotation | ||
| IL_1F7G_007 | 7/A/6:8, 7/A/21:22 | No text annotation | ||
| IL_1F7G_008 | 8/A/6:8, 8/A/21:22 | No text annotation | ||
| IL_1F7G_009 | 9/A/6:8, 9/A/21:22 | No text annotation | ||
| IL_1F7G_011 | 10/A/6:8, 10/A/21:22 | No text annotation | ||
| IL_1F7G_012 | 11/A/6:8, 11/A/21:22 | No text annotation | ||
| IL_1F7G_013 | 12/A/6:8, 12/A/21:22 | No text annotation | ||
| IL_1F7G_014 | 13/A/6:8, 13/A/21:22 | No text annotation | ||
| IL_1F7G_015 | 14/A/6:8, 14/A/21:22 | No text annotation | ||
| IL_1F7G_016 | 15/A/6:8, 15/A/21:22 | No text annotation | ||
| IL_1F7G_017 | 16/A/6:8, 16/A/21:22 | No text annotation | ||
| IL_1F7G_018 | 17/A/6:8, 17/A/21:22 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_1F7G_019 | No text annotation | ||
| IL_1F7G_002 | Isolated non-canonical cWW pair | ||
| IL_1F7G_005 | Isolated non-canonical cWW pair | ||
| IL_1F7G_010 | Isolated non-canonical cWW pair | ||
| IL_1F7G_020 | Isolated non-canonical cWW pair |
Valid loops
No loops found
Problematic loops
No problematic loops
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