1F7I Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_1F7I_001 | 1/A/12:17 | No text annotation | ||
| HL_1F7I_002 | 2/A/12:17 | No text annotation | geometric HL_8HNT_002 HL_56676.1 | |
| HL_1F7I_003 | 3/A/12:17 | No text annotation | ||
| HL_1F7I_004 | 4/A/12:17 | No text annotation | geometric HL_8HNT_002 HL_56676.1 | |
| HL_1F7I_005 | 5/A/12:17 | No text annotation | geometric HL_8HNT_002 HL_56676.1 | |
| HL_1F7I_006 | 6/A/12:17 | No text annotation | geometric HL_8HNT_002 HL_56676.1 | |
| HL_1F7I_007 | 7/A/12:17 | No text annotation | ||
| HL_1F7I_008 | 8/A/12:17 | No text annotation | geometric HL_5J7L_025 HL_87954.2 | |
| HL_1F7I_009 | 9/A/12:17 | No text annotation | geometric HL_5NFV_001 HL_69752.2 | |
| HL_1F7I_010 | 10/A/12:17 | No text annotation | ||
| HL_1F7I_011 | 11/A/12:17 | No text annotation | geometric HL_8HNT_002 HL_56676.1 | |
| HL_1F7I_012 | 12/A/12:17 | No text annotation | geometric HL_5U3G_001 HL_75660.5 |
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| IL_1F7I_001 | 1/A/6:8, 1/A/21:22 | No text annotation | ||
| IL_1F7I_002 | 2/A/6:8, 2/A/21:22 | No text annotation | ||
| IL_1F7I_003 | 3/A/6:8, 3/A/21:22 | No text annotation | ||
| IL_1F7I_018 | 4/A/6:8, 4/A/21:22 | No text annotation | ||
| IL_1F7I_019 | 5/A/6:8, 5/A/21:22 | No text annotation | ||
| IL_1F7I_006 | 6/A/6:8, 6/A/21:22 | No text annotation | ||
| IL_1F7I_007 | 7/A/6:8, 7/A/21:22 | No text annotation | ||
| IL_1F7I_008 | 8/A/6:8, 8/A/21:22 | No text annotation | ||
| IL_1F7I_009 | 9/A/6:8, 9/A/21:22 | No text annotation | ||
| IL_1F7I_010 | 10/A/6:8, 10/A/21:22 | No text annotation | ||
| IL_1F7I_012 | 11/A/6:8, 11/A/21:22 | Multiple bulged bases | geometric IL_6LTU_001 IL_84476.1 | |
| IL_1F7I_013 | 12/A/6:8, 12/A/21:22 | No text annotation |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_1F7I_014 | Isolated non-canonical cWW pair | ||
| IL_1F7I_004 | No text annotation | ||
| IL_1F7I_005 | No text annotation | ||
| IL_1F7I_015 | Isolated non-canonical cWW pair | ||
| IL_1F7I_016 | Isolated non-canonical cWW pair | ||
| IL_1F7I_017 | No text annotation | ||
| IL_1F7I_011 | Isolated non-canonical cWW pair |
Valid loops
No loops found
Problematic loops
No problematic loops
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