Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
HL_1F7I_0011/A/12:17No text annotation
HL_1F7I_0022/A/12:17No text annotation
geometric
HL_8HNT_002
HL_56676.1
HL_1F7I_0033/A/12:17No text annotation
HL_1F7I_0044/A/12:17No text annotation
geometric
HL_8HNT_002
HL_56676.1
HL_1F7I_0055/A/12:17No text annotation
geometric
HL_8HNT_002
HL_56676.1
HL_1F7I_0066/A/12:17No text annotation
geometric
HL_8HNT_002
HL_56676.1
HL_1F7I_0077/A/12:17No text annotation
HL_1F7I_0088/A/12:17No text annotation
geometric
HL_5J7L_025
HL_87954.2
HL_1F7I_0099/A/12:17No text annotation
geometric
HL_5NFV_001
HL_69752.2
HL_1F7I_01010/A/12:17No text annotation
HL_1F7I_01111/A/12:17No text annotation
geometric
HL_8HNT_002
HL_56676.1
HL_1F7I_01212/A/12:17No text annotation
geometric
HL_5U3G_001
HL_75660.5

Problematic loops

No problematic loops

Valid loops

3DLoop idLocationAnnotation; motif groupMapped info
IL_1F7I_0011/A/6:8,
1/A/21:22
No text annotation
IL_1F7I_0022/A/6:8,
2/A/21:22
No text annotation
IL_1F7I_0033/A/6:8,
3/A/21:22
No text annotation
IL_1F7I_0184/A/6:8,
4/A/21:22
No text annotation
IL_1F7I_0195/A/6:8,
5/A/21:22
No text annotation
IL_1F7I_0066/A/6:8,
6/A/21:22
No text annotation
IL_1F7I_0077/A/6:8,
7/A/21:22
No text annotation
IL_1F7I_0088/A/6:8,
8/A/21:22
No text annotation
IL_1F7I_0099/A/6:8,
9/A/21:22
No text annotation
IL_1F7I_01010/A/6:8,
10/A/21:22
No text annotation
IL_1F7I_01211/A/6:8,
11/A/21:22
Multiple bulged bases
geometric
IL_6LTU_001
IL_84476.1
IL_1F7I_01312/A/6:8,
12/A/21:22
No text annotation

Problematic loops

#loop idProblemSequence
IL_1F7I_014Isolated non-canonical cWW pair
IL_1F7I_004No text annotation
IL_1F7I_005No text annotation
IL_1F7I_015Isolated non-canonical cWW pair
IL_1F7I_016Isolated non-canonical cWW pair
IL_1F7I_017No text annotation
IL_1F7I_011Isolated non-canonical cWW pair

Valid loops

No loops found

Problematic loops

No problematic loops


Coloring options:
Copyright 2025 BGSU RNA group. Page generated in 0.0638 s