1M5K Summary
- Structure title
- Crystal structure of a hairpin ribozyme in the catalytically-active conformation
- Authors
- Rupert, P.B., Ferre-D'Amare, A.R.
- Release date
- 2002-08-02
- Experimental technique
- X-RAY DIFFRACTION
- Resolution
- 2.4 Å
- Chains
- 4 RNA chains from unknown source
- 2 other chains
- Nucleic acid compounds
- Other compounds
- RNA INHIBITOR SUBSTRATE, RNA HAIRPIN RIBOZYME, RNA INHIBITOR SUBSTRATE, RNA HAIRPIN RIBOZYME
- PROTEIN (U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A), PROTEIN (U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A)
Pairwise Interactions
Interactions annotated by FR3D:- 89 base-pairs
- 250 base-stacking
- 1 base-phosphate
- 3 base-ribose
RNA 3D Motifs
In the current release of the RNA 3D Motif Atlas, 1M5K contains:- 6 hairpin loops from 2 motif groups
- 7 internal loops from 2 motif groups
- 3 junction loops from 0 motif groups
3D Redundancy
1M5K has chains which belong to the following equivalence classes in the current representative set:- NR_all_48869.2 (2) rep
- NR_4.0_48869.2 (2) rep
- NR_3.5_48869.2 (2) rep
- NR_3.0_48869.2 (2) rep
- NR_20.0_48869.2 (2) rep
- NR_2.5_48869.2 (2) rep