1SZ1 Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_1SZ1_001 | 1/E/13:22 | tRNA D-loop | geometric HL_2CSX_001 HL_37101.1 | |
| HL_1SZ1_003 | 1/E/53:61 | No text annotation | geometric HL_1WZ2_007 HL_75660.7 | |
| HL_1SZ1_004 | 1/F/13:22 | tRNA D-loop | geometric HL_2CSX_001 HL_37101.1 | |
| HL_1SZ1_006 | 1/F/53:61 | No text annotation | geometric HL_1WZ2_007 HL_75660.7 |
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| HL_1SZ1_002 | No text annotation | ||
| HL_1SZ1_007 | tRNA anticodon loop | ||
| HL_1SZ1_005 | No text annotation | ||
| HL_1SZ1_008 | tRNA anticodon loop |
Valid loops
No loops found
Problematic loops
No problematic loops
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J4_1SZ1_001 | 1/E/7:10, 1/E/25:27, 1/E/43:49, 1/E/65:66 | tRNA junction | homologous J4_7EQJ_002 J4_95067.1 | |
| J4_1SZ1_002 | 1/F/7:10, 1/F/25:27, 1/F/43:49, 1/F/65:66 | tRNA junction | homologous J4_7EQJ_002 J4_95067.1 |
Problematic loops
No problematic loops
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